Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941988.1_cds_XP_016485638.1_76545
CDS Infomation

[gene=LOC107806038] [db_xref=GeneID:107806038] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like] [protein_id=XP_016485638.1] [location=complement(join(11893..12267,12404..12624,14114..14370,16605..16709,17190..17362,18638..18991))] [gbkey=CDS]
Sequence

ATGGAAGACTCCTTCTATAATCCCACTCCTGGGAGTGAGTCAAAGTCTGCGGTGACAGCT
GCTGTCACTACTAAAAATGAATCTAGATGGCACTCCACTGCTTCTGGCTCAAAGTCTTTT
GCAAATATAAGACAGATAGATCTGATAAAATATGGGAAGCAGAGAAGGGGGAGTGACAAT
CAGTTAGTTTTCTTTCTGGTTAAAGTTGCTGCTTTGGAGACTGTGCGGAGGATCTCGCAG
TCCAAATGTCCATTCGTATGGTCTGGCCTGCAAGCTCTGCAAGTTGTGTGCTACCCCCCA
CTTAAGTGGATGCAAAGGTGGAGTCCTTTTAGGGTTCTGGTTAACGGCATGCAGATGCTA
TCGCGGCCACTGCTAGTGCTCTCTATCGCTACAGCTTTTTCTGATCATTCAGAATTCGAT
AATGCTACCTCAGATATCACTCAAGTTTCCCCAGACACCAATGCTGTGCATTCTGATTCA
GAATCTCAGCTAGAATTCTCGTCTGAGCAATCTATCCCAAGTGAAAGGGTTGGCAATGAA
GTTTCTCCAAGTTCGTCTTCCACAAGTTCTGCAAGCTGGTTGCATCTGCTTTGCAAAGAT
CTGGAAAAGCAAGGAATTCGTTTGCCAGAGAGAATTGGTGAAGAGGAACTCCACCGATTT
TTTACGGCTGCAGATGGAGATTTTACTCGCTTACTTTCTTCAGTGAAGAAGACAATTCGC
TGGAGGGAGACTTACAGAATTCTTTCCAGACAAGAACTAGAAGTGTGGTCAAATATGGTC
TTTTGGCATGGATTTGATATGCAGCATCGGCCGTGCCTCATTGTCCGTCTTGGCTTAGCA
TGCATCAGCTTGCCATCTCGTGACAGACCTTGTTTCGCTCAAGCAGTAGTATCTCAGGTG
GAGCATGGGGTTCTTCATTTGGTGGACCCTCAAAATTCTCAAATTACTGTTTTGGTAGAC
TGTGAAGGACTATCTCCATTGAGACTTCCCATGCAAATGCTTAGATCCTGTTCTACTCTT
TTGCAAGATCACTTCCCCAACCGTTTAGGCTGCTTATTCATTATACGCCTTCCACCTATT
GTTCGAGTTGTGGCACAAACCTTTGTGCAAGTTTTCAAACCAGTCACTCGGCAAAAACTG
AAATTTGAAGGAGAAATGTACCAAAAGGTTCTTTCCGAGTGTTTGCAAACACTCCCGTCT
TATCTTGGTGGGCAGTGCACATGCTCAGGATGTGGTAGCTTTAGCGTTAGCGAGATGCGT
AAGGCTCGAATTTATGAACATCAAGGAATGGTGACAACAGAATCTATTAGCGATACTCTG
GATTTGACATCACCTAATTCAGGTGAACGGACTGAAATTCCGTCGAATTATACCTGTGAC
CAGGTCTTACGAAAGGCTGTGCTAGGTGTCCTTTTATTCTGGGTTTTTGTTGCTTTAATT
GCTGGAGTATATGATCCAGAAAGTCGTCCCATTTTACCTCCTTGA

Peptide Sequence

PEP ID

XP_016485638.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like [Nicotiana tabacum]
Sequence

MEDSFYNPTPGSESKSAVTAAVTTKNESRWHSTASGSKSFANIRQIDLIKYGKQRRGSDN
QLVFFLVKVAALETVRRISQSKCPFVWSGLQALQVVCYPPLKWMQRWSPFRVLVNGMQML
SRPLLVLSIATAFSDHSEFDNATSDITQVSPDTNAVHSDSESQLEFSSEQSIPSERVGNE
VSPSSSSTSSASWLHLLCKDLEKQGIRLPERIGEEELHRFFTAADGDFTRLLSSVKKTIR
WRETYRILSRQELEVWSNMVFWHGFDMQHRPCLIVRLGLACISLPSRDRPCFAQAVVSQV
EHGVLHLVDPQNSQITVLVDCEGLSPLRLPMQMLRSCSTLLQDHFPNRLGCLFIIRLPPI
VRVVAQTFVQVFKPVTRQKLKFEGEMYQKVLSECLQTLPSYLGGQCTCSGCGSFSVSEMR
KARIYEHQGMVTTESISDTLDLTSPNSGERTEIPSNYTCDQVLRKAVLGVLLFWVFVALI
AGVYDPESRPILPP

Transcript Sequence

Gene sequence data has not been registered.